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To install the program, perform the following steps: 0. Obtain the program files in ematrix-[version].tar.gz and the database files in einputs-blocks.tar.gz and einputs-seqs.tar.gz. Place them in the same directory, and then unpack each file: gunzip [file].tar.gz tar xvf [file].tar where [file] corresponds to the appropriate filename. 1. Connect to the ematrix directory. Edit the file site.defs to define various directories and default parameters. Do not include any extra spaces around the equals signs. 2. Follow the instructions in the file INSTALL. These are the standard installation instructions for the GNU configure package. Essentially, you will need to execute the following commands as the root user: ./configure make make install make check For a customized configuration, the GNU configure package allows you to set certain environment variables, such as CC (your desired C compiler), CXX (your desired C++ compiler), and CFLAGS, before you run configure. The package includes a Web interface. This interface will be located in the CGIDIR and HTMLDIR directories defined in site.defs. If you do not want to install the Web interface, you may delete these directories after installation. If you have any questions or comments, please contact Thomas Wu. - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - SYSTEM REQUIREMENTS A Unix machine with a C compiler Perl, version 5 or above (www.perl.org) |